http://www.wiki.mohid.com/index.php?action=history&feed=atom&title=MatLab_Tools 2026-04-05T00:42:45Z Revision history for this page on the wiki MediaWiki 1.28.0 http://www.wiki.mohid.com/index.php?title=MatLab_Tools&diff=475&oldid=prev 2008-12-03T10:27:15Z

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Guillaume http://www.wiki.mohid.com/index.php?title=MatLab_Tools&diff=474&oldid=prev 2008-01-11T11:52:16Z

<p></p> <p><b>New page</b></p><div>This is a colletion of simple scripts to enable the analysis of MOHID's results in [[MatLab]].<br /> Many of these are useful for code reference, for implementing your own scripts.<br /> <br /> These tools are available to [[MOHID]] users and developers in the [[SourceSafe]] database &quot;OtherTools/MatLab&quot;.<br /> <br /> == Scripts availiable ==<br /> <br /> Basic scripts for '''opening and reading''' the contents of MOHID HDF5 files, there are the following scripts:<br /> * mh5grid.m : reads and outputs the Grid group from a file<br /> * mh5read.m : reads and outputs a specific dataset instant(or several) from a file<br /> * mh5info.m : reads and outputs some information on the file, as well as the number of instants.<br /> <br /> For plotting MOHID HDF5 files, usually saving as png file:<br /> * mh5ts_plot.m : plots a timeserie of a property in model cell(i,j,z)<br /> * can plot a station timeserie and the model's for comparision(using waterbase_ts.mat)<br /> * can plot several properties in one plot using morewaterpropz<br /> * mh5xy_plot.m : plots an x-y graph at layer z for several instants within a file<br /> * can do a gif of the images generated<br /> * mh5zt_plot.m : plots a z-t graph, creating a vertical profile versus time graph.<br /> <br /> Converting a [[netcdf]] file to a MOHID HDF5 file:<br /> * nc2mh5_convert.m<br /> <br /> Model's timeserie analysis, for e.g., box files:<br /> * ts_BoxAnalyser.m : plots each box's properties versus time<br /> * ts_PhytoLimFactors.m : plots each box's phytoplankton limitation<br /> * ts_BoxFluxAnalyser.m : for reference, plots the fluxes between boxes. Can use a box image to plot arrows.<br /> <br /> Extra scripts for plotting(may be usefull for code reference):<br /> * mh5strat_analyser.m : plots(x-y) the difference between two layers. <br /> Usefull to check oxygen depletion or stratification.<br /> * mh5temp_comp.m : compares the temperature field with the assimilation temperature<br /> <br /> <br /> [[Category:Tools]]<br /> [[Category:Matlab]]</div>

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